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CPS653 Chang-Yun L.

                              Stochastic search variable selection for definitive
                                   screening designs in split-plot and block
                                                  structures
                                                Chang-Yun Lin
                      Department of Applied Mathematics and Institute of Statistics, National Chung Hsing
                                            University, Taichung, Taiwan

                  Abstract
                  Split-plot  definitive  screening  (SPDS)  and  block  definitive  screening  (BDS)
                  designs  have  been  developed  for  detecting  active  second-order  effects  in
                  screening  experiments  when  split-plot  and  block  structures  exist.  In  the
                  literature, the multistage regression (MSR) and forward stepwise regression
                  (FSR) methods were proposed for analyzing data for the two types of designs.
                  However,  there  are  some  limitations  and  potential  problems  with  the
                  regression approaches. First, the degrees of freedom may not be large enough
                  to  estimate  all  active  effects.  Second,  the  restricted  maximum  likelihood
                  (REML) estimate for the variances of whole-plot and block errors can be zero.
                  To  overcome  these  problems  and  to  enhance  the  detection  capability,  we
                  propose a stochastic search variable selection (SSVS) method based on the
                  Bayesian theory. Different from the existing Bayesian approaches for split-plot
                  and block designs, the proposed SSVS method can perform variable selections
                  and choose more reasonable models which follow the effect heredity principle.
                  The Markov chain Monte Carlo and Gibbs sampling are applied and a general
                  WinBUGS code that can be used for any SPDS and BDS designs is provided.
                  Simulation studies are conducted and results show that the proposed SSVS
                  method  well  controls  the  false  discovery  rate  and  has  higher  detection
                  capability than the regression methods.

                  1.  Introduction
                      Split-plot definitive screening (SPDS) and block definitive screening (BDS)
                  designs  have  been  developed  for  detecting  active  second-order  effects  in
                  screening  experiments  when  split-plot  and  block  structures  exist.  In  the
                  literature, the multistage regression (MSR) and forward stepwise regression
                  (FSR) methods were proposed for analyzing data for the two types of designs.
                  However,  there  are  some  limitations  and  potential  problems  with  the
                  regression approaches. First, the degrees of freedom may not be large enough
                  to  estimate  all  active  effects.  Second,  the  restricted  maximum  likelihood
                  (REML) estimate for the variances of whole-plot and block errors can be zero.
                  To  overcome  these  problems  and  to  enhance  the  detection  capability,  we
                  propose a stochastic search variable selection (SSVS) method based on the
                  Bayesian theory. Different from the existing Bayesian approaches for split-plot
                  and block designs, the proposed SSVS method can perform variable selections
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