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CPS1916 Erica P. et al.
                  of  the  study  is  given  in  Sinharay  et  al.  (2017).  The  association  between
                  metabolite levels and TRAP exposures was assessed in van Veldhoven et al.
                  (2018)  in  a  mixed  model  framework,  including  random  effects  for  the
                  individual, as well as for the location and time point of each measurement.
                  Fixed effects were sex, age, body mass index (BMI), caffeine intake and health
                  group, as well as annual and instantaneous measurements of the exposure of
                  interest.  Five  exposures  were  considered  separately,  namely  black  carbon
                  (CBLK), nitrogen dioxide (NO2), particulate matter (PM10 and PM25) and ultra-
                  fine particles (UFP).
                      The model was fitted on each of the 5749 measured metabolic features
                  and  results  were  then  corrected  for  multiple  testing  using  a  Bonferroni-
                  corrected significance level. We formulated the same model using a Bayesian
                  framework and included an additional component to model the presence of
                  measurement  error.  We  assumed  a  classical  measurement  error  for  the
                  different pollutants, i.e. that the exposure variable Z can be observed only via
                  a proxy W, such that
                                                  W = Z + U

                                               With  ~  (0,  )
                                                              2
                                                              

                      Such formulation was included in the model by adding a latent variable for
                  the exposure, namely a normally distributed variable with mean equal to 0 and
                  variance equal to the error variance and resulting in the following hierarchical
                  structure:











                      A vague gamma prior was used for the error variance, with shape and scale
                  parameters equal to 0.0001. Informative priors were used as well, based on
                  previous knowledge of the error variance on similar pollutants.
                      To model the presence of a Berkson measurement error, we assumed that
                  Z=W+U. It is a different scenario than the one depicted in the previous section,
                  as the observed variance is actually less than the real one, as opposed to a
                  classical framework where the presence of the error leads to an increase in the
                  observed variance of a variable. In the presence of a Berkson measurement
                  error, the expected attenuation of the effect of the error-prone variable is
                  lower,  as  the  bias  is  not  expected  to  propagate  to  the  estimates  of  the
                  regression parameters (Carroll et al., 2006).



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