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CPS1878 Zakir H. et al.
            3.1.1    Results of misspecification of the random effects distributions
                We simulate Poisson data from M1 with correlated random effects (block
            effects and errors) those are generated from normal, uniform and transformed
            t3 with the same mean and variance but different shapes. We t M1 under the
            assumption that random effects are normally distributed to the same set of
            simulated  data.  From  Figure  5  it  can  be  seen  that  there  is  no  substantial
            differences in the relative biases of ̂ , ̂  and ̂  for all nine treatment-block
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                                                1
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            combinations  under  three  different  random  effects  distributions  (normal,
            uniform, t3).
               Figure 5: Percent relative biases of ̂ , ̂  and ̂  among normal, uniform and t3
                                               1
                                                  2
                                                        3
                                            distributions.













                  Figure 6: SEs of ̂ , ̂  and ̂  among normal, uniform and t3 distributions.
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                                 1














                For  normal, uniform and t3 random effects distributions, it can be seen
            from Figure 6 that the empirical SEs of ̂ , ̂  and ̂ αˆ3 do not differ in all nine
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                                                   1
                                                      2
            treatment-block  combinations.  From  both  panels  it  can  be  seen  that  the
                                             2
                                      2
            percent relative biases of ̂ and ̂ are very close to each other in the case of
                                      
                                             
            normal and uniform random effects distributions. However, it seems that ̂  2
                   2
            and  ̂   are  severely  biased  and  underestimated  in  all  treatment-block
            combinations when random effects are generated from t3 (t-distribution with
            3 degrees of freedom). The amount of bias is substantially higher (-40% to -
            10%) for t3 than for normal and uniform random effects distributions.


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